Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00270 | Not Available | Negative | 274292 - 274414 | 4565.67 |
| multidrug export protein emra | EQ875_00271 | Not Available | Positive | 274934 - 275977 | 37196.8 |
| multidrug export protein emrb | EQ875_00272 | Not Available | Positive | 275980 - 277518 | 55973.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | EQ875_00273 | Not Available | Negative | 277614 - 278426 | 29928.8 |
| dipeptide and tripeptide permease a | EQ875_00274 | Not Available | Positive | 278784 - 280265 | 53624.9 |
| cation efflux system protein cusa | EQ875_00275 | Not Available | Negative | 280388 - 283513 | 114002.0 |
| multidrug resistance protein mdta | EQ875_00276 | Not Available | Negative | 283513 - 285234 | 63028.8 |
| hypothetical protein | EQ875_00277 | Not Available | Negative | 285243 - 286520 | 48008.2 |
| hypothetical protein | EQ875_00278 | Not Available | Negative | 286658 - 287059 | 14659.4 |
| hypothetical protein | EQ875_00279 | Not Available | Negative | 287128 - 287241 | 3906.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


