Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00230 | Not Available | Positive | 232043 - 233323 | 47486.0 |
| putative phospholipid-binding lipoprotein mlaa | EQ875_00231 | Not Available | Positive | 233594 - 234409 | 30390.6 |
| outer membrane protein p1 | EQ875_00232 | Not Available | Negative | 234499 - 235833 | 47493.5 |
| long-chain fatty acid transport protein | EQ875_00233 | Not Available | Negative | 236199 - 237440 | 45002.7 |
| hypothetical protein | EQ875_00234 | Not Available | Negative | 237829 - 238542 | 26104.2 |
| hypothetical protein | EQ875_00235 | Not Available | Negative | 238529 - 239101 | 22476.7 |
| 3-ketoacyl-coa thiolase fadi | EQ875_00236 | Not Available | Positive | 239748 - 241058 | 46550.2 |
| fatty acid oxidation complex subunit alpha | EQ875_00237 | Not Available | Positive | 241058 - 243178 | 77335.7 |
| hypothetical protein | EQ875_00238 | Not Available | Negative | 243251 - 243532 | 10926.4 |
| protease 3 | EQ875_00239 | Not Available | Negative | 243725 - 246490 | 105985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


