Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00201 | Not Available | Positive | 205169 - 206971 | 64256.5 |
| hypothetical protein | EQ875_00202 | Not Available | Positive | 207006 - 207470 | 17107.8 |
| flagellar motor switch protein flim | EQ875_00203 | Not Available | Positive | 207478 - 208521 | 39277.4 |
| flagellar motor switch protein flin | EQ875_00204 | Not Available | Positive | 208536 - 208922 | 14080.7 |
| hypothetical protein | EQ875_00205 | Not Available | Positive | 208922 - 209260 | 12230.2 |
| flagellar biosynthetic protein flip | EQ875_00206 | Not Available | Positive | 209277 - 210065 | 28352.6 |
| hypothetical protein | EQ875_00207 | Not Available | Positive | 210062 - 210331 | 10096.0 |
| hypothetical protein | EQ875_00208 | Not Available | Positive | 210344 - 211126 | 29052.6 |
| flagellar biosynthetic protein flhb | EQ875_00209 | Not Available | Positive | 211198 - 212328 | 42061.4 |
| flagellar biosynthesis protein flha | EQ875_00210 | Not Available | Positive | 212575 - 214680 | 75971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


