Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative lambda repressor | EQ875_01630 | Not Available | Negative | 1800843 - 1801493 | 24262.5 |
| Hypothetical protein | EQ875_01631 | Not Available | Positive | 1801619 - 1801924 | 11508.7 |
| hypothetical protein | EQ875_01632 | Not Available | Positive | 1801866 - 1802183 | 12060.5 |
| hypothetical protein | EQ875_01633 | Not Available | Positive | 1802170 - 1802361 | 6996.5 |
| Hypothetical protein | EQ875_01634 | Not Available | Positive | 1802361 - 1803218 | 31866.4 |
| Putative replication protein p | EQ875_01635 | Not Available | Positive | 1803235 - 1803888 | 24737.5 |
| hypothetical protein | EQ875_01636 | Not Available | Positive | 1803881 - 1804225 | 13031.5 |
| hypothetical protein | EQ875_01637 | Not Available | Positive | 1804215 - 1804448 | 8431.13 |
| Kila | EQ875_01638 | Not Available | Positive | 1804423 - 1805127 | 26273.9 |
| hypothetical protein | EQ875_01639 | Not Available | Positive | 1805124 - 1805366 | 8841.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


