Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-regulated potassium-efflux system ancillary protein kefg | EQ875_02728 | Not Available | Negative | 3044360 - 3044974 | 23493.2 |
| alcohol dehydrogenase yqhd | EQ875_02729 | Not Available | Positive | 3045258 - 3046406 | 41621.6 |
| scyllo-inositol 2-dehydrogenase (nadp(+)) iolu | EQ875_02730 | Not Available | Positive | 3046428 - 3047414 | 36634.5 |
| hypothetical protein | EQ875_02731 | Not Available | Negative | 3047569 - 3048051 | 18184.4 |
| putative pseudouridine methyltransferase | EQ875_02732 | Not Available | Negative | 3048074 - 3048673 | 22263.9 |
| multidrug resistance protein mdtn | EQ875_02733 | Not Available | Positive | 3048802 - 3049863 | 38746.1 |
| hypothetical protein | EQ875_02734 | Not Available | Positive | 3049876 - 3050895 | 38075.7 |
| hypothetical protein | EQ875_02735 | Not Available | Positive | 3050867 - 3051322 | 17198.2 |
| hypothetical protein | EQ875_02736 | Not Available | Positive | 3051548 - 3052204 | 24848.7 |
| hypothetical protein | EQ875_02737 | Not Available | Positive | 3052227 - 3053318 | 38673.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


