Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02718 | Not Available | Positive | 3036123 - 3036545 | 16092.6 |
| atp-dependent rna helicase rhle | EQ875_02719 | Not Available | Positive | 3036721 - 3038016 | 47573.4 |
| hypothetical protein | EQ875_02720 | Not Available | Positive | 3038162 - 3038404 | 8971.71 |
| hypothetical protein | EQ875_02721 | Not Available | Positive | 3038412 - 3038711 | 11488.8 |
| hypothetical protein | EQ875_02722 | Not Available | Positive | 3038757 - 3039137 | 14449.3 |
| hypothetical protein | EQ875_02723 | Not Available | Negative | 3039212 - 3039700 | 18267.8 |
| hypothetical protein | EQ875_02724 | Not Available | Negative | 3039711 - 3039926 | 8252.24 |
| hypothetical protein | EQ875_02725 | Not Available | Negative | 3039930 - 3040469 | 20572.4 |
| hypothetical protein | EQ875_02726 | Not Available | Negative | 3040588 - 3042279 | 64493.8 |
| glutathione-regulated potassium-efflux system protein kefc | EQ875_02727 | Not Available | Negative | 3042390 - 3044354 | 71572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


