Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation/acetate symporter actp | EQ875_02668 | Not Available | Positive | 2975624 - 2977327 | 60836.6 |
| sensor histidine kinase rcsc | EQ875_02669 | Not Available | Negative | 2977399 - 2980881 | 128337.0 |
| putative 3-phenylpropionic acid transporter | EQ875_02670 | Not Available | Negative | 2981021 - 2982199 | 42961.6 |
| hypothetical protein | EQ875_02671 | Not Available | Positive | 2982243 - 2982443 | 7528.32 |
| acetyl-coenzyme a synthetase | EQ875_02672 | Not Available | Positive | 2982509 - 2984458 | 71920.2 |
| 3-dehydroquinate dehydratase | EQ875_02673 | Not Available | Positive | 2984965 - 2985417 | 16277.5 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | EQ875_02674 | Not Available | Positive | 2985447 - 2985893 | 15665.9 |
| biotin carboxylase | EQ875_02675 | Not Available | Positive | 2985906 - 2987249 | 49423.7 |
| hypothetical protein | EQ875_02676 | Not Available | Positive | 2987452 - 2987769 | 12125.8 |
| sodium/pantothenate symporter | EQ875_02677 | Not Available | Positive | 2987762 - 2989219 | 51660.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


