Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02523 | EQ875_02576 | Not Available | Negative | 2900653 - 2901657 | Not Available |
| glucose-6-phosphate isomerase | EQ875_02607 | Not Available | Negative | 2917415 - 2919067 | 61069.4 |
| hypothetical protein | EQ875_02608 | Not Available | Positive | 2919301 - 2919720 | 15764.8 |
| hypothetical protein | EQ875_02609 | Not Available | Negative | 2919818 - 2921089 | 47362.7 |
| alanine racemase, biosynthetic | EQ875_02610 | Not Available | Negative | 2921114 - 2922193 | 38719.6 |
| replicative dna helicase | EQ875_02611 | Not Available | Negative | 2922232 - 2923629 | 51633.6 |
| hypothetical protein | EQ875_02612 | Not Available | Positive | 2923909 - 2924676 | 28930.0 |
| 50s ribosomal protein l9 | EQ875_02613 | Not Available | Negative | 2924860 - 2925312 | 15680.9 |
| 30s ribosomal protein s18 | EQ875_02614 | Not Available | Negative | 2925351 - 2925578 | 8912.89 |
| primosomal replication protein n | EQ875_02615 | Not Available | Negative | 2925594 - 2925896 | 10953.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


