Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02566 | Not Available | Negative | 2891651 - 2892493 | 30601.1 |
| fkbp-type 22 kda peptidyl-prolyl cis-trans isomerase | EQ875_02567 | Not Available | Positive | 2892616 - 2893236 | 22026.2 |
| hypothetical protein | EQ875_02568 | Not Available | Positive | 2893406 - 2893888 | 16607.8 |
| hypothetical protein | EQ875_02569 | Not Available | Negative | 2894048 - 2894377 | 12252.3 |
| phosphoadenosine phosphosulfate reductase | EQ875_02570 | Not Available | Negative | 2894514 - 2895278 | 29031.7 |
| sulfite reductase | EQ875_02571 | Not Available | Negative | 2895271 - 2896962 | 63112.4 |
| sulfite reductase | EQ875_02572 | Not Available | Negative | 2896962 - 2898788 | 67480.6 |
| hypothetical protein | EQ875_02573 | Not Available | Negative | 2898969 - 2899199 | 8638.05 |
| hypothetical protein | EQ875_02574 | Not Available | Negative | 2899407 - 2900027 | 22569.6 |
| phage shock protein g | EQ875_02575 | Not Available | Negative | 2900160 - 2900399 | 8994.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


