Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_00151 | Not Available | Positive | 155426 - 155887 | 17554.9 |
| hypothetical protein | EQ875_00152 | Not Available | Positive | 155893 - 156294 | 14760.5 |
| putative deferrochelatase/peroxidase yfex | EQ875_00153 | Not Available | Positive | 156905 - 157801 | 33436.7 |
| pts system glucose-specific eiia component | EQ875_00154 | Not Available | Negative | 157935 - 158444 | 18096.8 |
| phosphoenolpyruvate-protein phosphotransferase | EQ875_00155 | Not Available | Negative | 158485 - 160212 | 63595.5 |
| phosphocarrier protein hpr | EQ875_00156 | Not Available | Negative | 160268 - 160555 | 10129.2 |
| cysteine synthase a | EQ875_00157 | Not Available | Negative | 160873 - 161841 | 34279.1 |
| sulfate transporter cysz | EQ875_00158 | Not Available | Negative | 162097 - 162855 | 28880.9 |
| cell division protein zipa | EQ875_00159 | Not Available | Positive | 163186 - 164391 | 43792.3 |
| dna ligase | EQ875_00160 | Not Available | Positive | 164545 - 166560 | 74595.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


