Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02516 | Not Available | Positive | 2835667 - 2836026 | 13303.8 |
| putative gluconeogenesis factor | EQ875_02517 | Not Available | Negative | 2835991 - 2836884 | 32280.9 |
| hypothetical protein | EQ875_02518 | Not Available | Negative | 2837047 - 2837622 | 22568.2 |
| hypothetical protein | EQ875_02519 | Not Available | Negative | 2837743 - 2837970 | 8345.95 |
| gtp 3',8-cyclase | EQ875_02520 | Not Available | Positive | 2838294 - 2839280 | 37119.6 |
| cyclic pyranopterin monophosphate synthase | EQ875_02521 | Not Available | Positive | 2839354 - 2839833 | 17172.9 |
| molybdopterin synthase sulfur carrier subunit | EQ875_02522 | Not Available | Positive | 2839830 - 2840075 | 8861.64 |
| molybdopterin synthase catalytic subunit | EQ875_02523 | Not Available | Positive | 2840078 - 2840527 | 16839.7 |
| hypothetical protein | EQ875_02524 | Not Available | Positive | 2840858 - 2841424 | 22246.6 |
| hypothetical protein | EQ875_02525 | Not Available | Negative | 2841508 - 2841633 | 4636.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


