Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02404 | Not Available | Negative | 2704419 - 2705075 | 23866.4 |
| hypothetical protein | EQ875_02405 | Not Available | Negative | 2705065 - 2705568 | 17931.6 |
| hypothetical protein | EQ875_02406 | Not Available | Negative | 2705655 - 2706146 | 16553.8 |
| hypothetical protein | EQ875_02407 | Not Available | Negative | 2706170 - 2706772 | 21381.4 |
| hypothetical protein | EQ875_02408 | Not Available | Negative | 2706801 - 2707271 | 18295.3 |
| type ii secretion system protein f | EQ875_02409 | Not Available | Negative | 2707261 - 2708478 | 44821.5 |
| hypothetical protein | EQ875_02410 | Not Available | Negative | 2708488 - 2710203 | 63738.2 |
| hypothetical protein | EQ875_02411 | Not Available | Negative | 2710208 - 2711374 | 42409.6 |
| hypothetical protein | EQ875_02412 | Not Available | Negative | 2711371 - 2712219 | 31772.9 |
| hypothetical protein | EQ875_02413 | Not Available | Negative | 2712223 - 2713917 | 60526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


