Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02374 | Not Available | Negative | 2672868 - 2673179 | 11721.2 |
| putative phospholipid-binding protein mlac | EQ875_02375 | Not Available | Negative | 2673182 - 2673817 | 24008.2 |
| putative phospholipid abc transporter-binding protein mlad | EQ875_02376 | Not Available | Negative | 2673827 - 2674306 | 17098.7 |
| putative phospholipid abc transporter permease protein mlae | EQ875_02377 | Not Available | Negative | 2674332 - 2675114 | 27955.1 |
| putative phospholipid import atp-binding protein mlaf | EQ875_02378 | Not Available | Negative | 2675143 - 2675955 | 29352.5 |
| inner membrane protein yrbg | EQ875_02379 | Not Available | Positive | 2676398 - 2677363 | 33772.7 |
| arabinose 5-phosphate isomerase kdsd | EQ875_02380 | Not Available | Positive | 2677380 - 2678348 | 34382.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase kdsc | EQ875_02381 | Not Available | Positive | 2678348 - 2678905 | 20420.6 |
| lipopolysaccharide export system protein lptc | EQ875_02382 | Not Available | Positive | 2678902 - 2679465 | 21149.9 |
| lipopolysaccharide export system protein lpta | EQ875_02383 | Not Available | Positive | 2679446 - 2679952 | 18768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


