Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_02264 | Not Available | Positive | 2547803 - 2549044 | 44829.2 |
| hypothetical protein | EQ875_02265 | Not Available | Positive | 2549034 - 2549699 | 24909.3 |
| hypothetical protein | EQ875_02266 | Not Available | Negative | 2549810 - 2553724 | 150581.0 |
| zinc transport protein zntb | EQ875_02267 | Not Available | Positive | 2554064 - 2555029 | 36648.9 |
| hypothetical protein | EQ875_02268 | Not Available | Positive | 2555111 - 2555566 | 17126.5 |
| hypothetical protein | EQ875_02269 | Not Available | Positive | 2555725 - 2556936 | 44865.9 |
| hypothetical protein | EQ875_02270 | Not Available | Positive | 2556957 - 2557190 | 8907.97 |
| hypothetical protein | EQ875_02271 | Not Available | Negative | 2557368 - 2558270 | 34563.3 |
| putative cryptic c4-dicarboxylate transporter dcud | EQ875_02272 | Not Available | Positive | 2558784 - 2560163 | 49443.9 |
| hypothetical protein | EQ875_02273 | Not Available | Negative | 2560784 - 2561131 | 13328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


