Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ampg | EQ875_00113 | Not Available | Negative | 120969 - 122354 | 50538.5 |
| hypothetical protein | EQ875_00114 | Not Available | Negative | 122479 - 122838 | 13754.1 |
| peptidyl-prolyl cis-trans isomerase a | EQ875_00115 | Not Available | Negative | 122882 - 123433 | 19910.3 |
| hypothetical protein | EQ875_00116 | Not Available | Negative | 123433 - 124017 | 21410.8 |
| ribosomal rna large subunit methyltransferase g | EQ875_00117 | Not Available | Negative | 124045 - 125169 | 41935.8 |
| dna-binding transcriptional regulator bola | EQ875_00118 | Not Available | Positive | 125283 - 125594 | 11688.8 |
| na(+)-translocating nadh-quinone reductase subunit a | EQ875_00119 | Not Available | Positive | 126205 - 127545 | 48529.5 |
| na(+)-translocating nadh-quinone reductase subunit b | EQ875_00120 | Not Available | Positive | 127549 - 128793 | 45409.9 |
| na(+)-translocating nadh-quinone reductase subunit c | EQ875_00121 | Not Available | Positive | 128783 - 129577 | 28740.3 |
| na(+)-translocating nadh-quinone reductase subunit d | EQ875_00122 | Not Available | Positive | 129570 - 130202 | 22771.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


