Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01972 | Not Available | Positive | 2245066 - 2245437 | 14023.4 |
| hypothetical protein | EQ875_01973 | Not Available | Negative | 2245476 - 2245742 | 9820.32 |
| hypothetical protein | EQ875_01974 | Not Available | Negative | 2246005 - 2246343 | 12461.7 |
| putrescine transporter pote | EQ875_01975 | Not Available | Negative | 2246634 - 2247959 | 46743.9 |
| coniferyl aldehyde dehydrogenase | EQ875_01976 | Not Available | Negative | 2248619 - 2250079 | 54472.1 |
| hypothetical protein | EQ875_01977 | Not Available | Negative | 2250192 - 2250773 | 22366.8 |
| hypothetical protein | EQ875_01978 | Not Available | Negative | 2250833 - 2251279 | 16506.1 |
| hypothetical protein | EQ875_01979 | Not Available | Positive | 2251355 - 2251813 | 17593.2 |
| pyridoxal phosphate phosphatase yigl | EQ875_01980 | Not Available | Negative | 2251880 - 2252677 | 29509.2 |
| lysophospholipase l2 | EQ875_01981 | Not Available | Negative | 2252829 - 2253821 | 37821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


