Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01892 | Not Available | Positive | 2148353 - 2148874 | 18594.9 |
| hypothetical protein | EQ875_01893 | Not Available | Positive | 2148892 - 2151648 | 94842.0 |
| secretory immunoglobulin a-binding protein esib | EQ875_01894 | Not Available | Negative | 2151833 - 2152933 | 41637.2 |
| hypothetical protein | EQ875_01895 | Not Available | Positive | 2152996 - 2153589 | 22229.4 |
| anaerobic nitric oxide reductase transcription regulator norr | EQ875_01896 | Not Available | Positive | 2153810 - 2155150 | 51306.9 |
| hypothetical protein | EQ875_01897 | Not Available | Negative | 2155154 - 2155960 | 31710.4 |
| hypothetical protein | EQ875_01898 | Not Available | Negative | 2156019 - 2157122 | 42260.3 |
| anaerobic ribonucleoside-triphosphate reductase | EQ875_01899 | Not Available | Positive | 2157449 - 2159587 | 79952.6 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | EQ875_01900 | Not Available | Positive | 2159681 - 2160157 | 17964.2 |
| hypothetical protein | EQ875_01901 | Not Available | Negative | 2160250 - 2162844 | 91759.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


