Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase der | EQ875_00075 | Not Available | Positive | 78001 - 79500 | 56033.2 |
| hypothetical protein | EQ875_00076 | Not Available | Negative | 79559 - 80098 | 20740.4 |
| hypothetical protein | EQ875_00077 | Not Available | Negative | 80095 - 80595 | 17082.5 |
| hypothetical protein | EQ875_00078 | Not Available | Positive | 80782 - 81654 | 32938.9 |
| putative protein yfgj | EQ875_00079 | Not Available | Positive | 82133 - 82369 | 8838.42 |
| exodeoxyribonuclease 7 large subunit | EQ875_00080 | Not Available | Negative | 82487 - 83827 | 50075.4 |
| inosine-5'-monophosphate dehydrogenase | EQ875_00081 | Not Available | Positive | 84144 - 85607 | 51919.5 |
| gmp synthase | EQ875_00082 | Not Available | Positive | 85722 - 87305 | 58700.3 |
| p-aminobenzoyl-glutamate transport protein | EQ875_00083 | Not Available | Positive | 87777 - 89339 | 55188.9 |
| s-formylglutathione hydrolase yeig | EQ875_00084 | Not Available | Negative | 89482 - 90327 | 31547.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


