Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01670 | Not Available | Negative | 1832633 - 1833217 | 20891.2 |
| hypothetical protein | EQ875_01671 | Not Available | Negative | 1833201 - 1833782 | 21663.8 |
| type ii secretion system protein g | EQ875_01672 | Not Available | Positive | 1833918 - 1834307 | 14150.0 |
| hypothetical protein | EQ875_01673 | Not Available | Negative | 1834427 - 1835320 | 34586.9 |
| hypothetical protein | EQ875_01674 | Not Available | Positive | 1835554 - 1837059 | 58460.7 |
| hypothetical protein | EQ875_01675 | Not Available | Negative | 1837092 - 1837511 | 16215.7 |
| alpha-maltose-1-phosphate synthase | EQ875_01676 | Not Available | Negative | 1837527 - 1838636 | 41427.8 |
| alpha-maltose-1-phosphate synthase | EQ875_01677 | Not Available | Negative | 1838696 - 1839901 | 44995.9 |
| hypothetical protein | EQ875_01678 | Not Available | Negative | 1839916 - 1841139 | 46215.8 |
| serine acetyltransferase | EQ875_01679 | Not Available | Negative | 1841143 - 1841643 | 17652.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


