Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01423 | Not Available | Positive | 1586438 - 1586605 | 6587.14 |
| hypothetical protein | EQ875_01424 | Not Available | Positive | 1586763 - 1587590 | 30592.4 |
| hypothetical protein | EQ875_01425 | Not Available | Positive | 1587806 - 1588321 | 17556.7 |
| hypothetical protein | EQ875_01426 | Not Available | Positive | 1588379 - 1588873 | 18645.5 |
| hypothetical protein | EQ875_01427 | Not Available | Positive | 1588900 - 1591638 | 103646.0 |
| hypothetical protein | EQ875_01428 | Not Available | Positive | 1591648 - 1592364 | 27199.7 |
| hypothetical protein | EQ875_01429 | Not Available | Positive | 1592330 - 1593448 | 41556.7 |
| hypothetical protein | EQ875_01430 | Not Available | Positive | 1593456 - 1594799 | 48864.1 |
| hypothetical protein | EQ875_01431 | Not Available | Positive | 1594811 - 1597264 | 91154.4 |
| hypothetical protein | EQ875_01432 | Not Available | Positive | 1597314 - 1599803 | 94315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


