Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase epta | EQ875_01313 | Not Available | Negative | 1455031 - 1456671 | 61990.9 |
| hypothetical protein | EQ875_01314 | Not Available | Positive | 1457062 - 1457493 | 16738.8 |
| hypothetical protein | EQ875_01315 | Not Available | Negative | 1457552 - 1457788 | 8393.09 |
| putative esterase | EQ875_01316 | Not Available | Negative | 1457785 - 1458219 | 15956.2 |
| outer membrane protein a | EQ875_01317 | Not Available | Negative | 1458357 - 1459364 | 36875.7 |
| hypothetical protein | EQ875_01318 | Not Available | Positive | 1459753 - 1461231 | 54407.5 |
| atp-dependent rna helicase dbpa | EQ875_01319 | Not Available | Negative | 1461315 - 1462706 | 50706.3 |
| hypothetical protein | EQ875_01320 | Not Available | Negative | 1462797 - 1464374 | 57325.0 |
| choline-sulfatase | EQ875_01321 | Not Available | Negative | 1464581 - 1466200 | 60526.2 |
| hypothetical protein | EQ875_01322 | Not Available | Negative | 1466396 - 1466944 | 20620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


