Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01293 | Not Available | Negative | 1431898 - 1432263 | 14058.4 |
| lipoprotein lpri | EQ875_01294 | Not Available | Positive | 1432482 - 1433060 | 21320.4 |
| aromatic-amino-acid aminotransferase | EQ875_01295 | Not Available | Negative | 1433175 - 1434353 | 42800.6 |
| hypothetical protein | EQ875_01296 | Not Available | Positive | 1434521 - 1434829 | 11762.8 |
| 3-ketoacyl-coa thiolase | EQ875_01297 | Not Available | Negative | 1434901 - 1436064 | 41259.1 |
| fatty acid oxidation complex subunit alpha | EQ875_01298 | Not Available | Negative | 1436079 - 1438226 | 78744.6 |
| butanoate coenzyme a-transferase | EQ875_01299 | Not Available | Negative | 1438243 - 1439550 | 46812.0 |
| hypothetical protein | EQ875_01300 | Not Available | Positive | 1439817 - 1440848 | 39678.5 |
| hypothetical protein | EQ875_01301 | Not Available | Negative | 1440884 - 1442449 | 57414.1 |
| riboflavin transporter ribz | EQ875_01302 | Not Available | Negative | 1442502 - 1444160 | 58210.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


