Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01233 | Not Available | Positive | 1365834 - 1367534 | 65738.2 |
| hypothetical protein | EQ875_01234 | Not Available | Negative | 1367557 - 1368165 | 23369.9 |
| hypothetical protein | EQ875_01235 | Not Available | Negative | 1368169 - 1368678 | 19970.8 |
| hypothetical protein | EQ875_01236 | Not Available | Negative | 1368705 - 1369247 | 20495.0 |
| tuberculostearic acid methyltransferase ufaa1 | EQ875_01237 | Not Available | Negative | 1369284 - 1370534 | 47761.0 |
| hypothetical protein | EQ875_01238 | Not Available | Negative | 1370554 - 1371429 | 34372.6 |
| hypothetical protein | EQ875_01239 | Not Available | Negative | 1371429 - 1372736 | 49971.1 |
| putative oxidoreductase | EQ875_01240 | Not Available | Negative | 1372733 - 1373512 | 28266.3 |
| hypothetical protein | EQ875_01241 | Not Available | Negative | 1373509 - 1373949 | 17037.3 |
| deoxyribodipyrimidine photo-lyase | EQ875_01242 | Not Available | Negative | 1374034 - 1375518 | 57138.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


