Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01183 | Not Available | Negative | 1317782 - 1318111 | 12007.5 |
| protein lysine acetyltransferase pat | EQ875_01184 | Not Available | Negative | 1318476 - 1321175 | 99302.9 |
| hypothetical protein | EQ875_01185 | Not Available | Negative | 1321298 - 1321807 | 18814.3 |
| cell division protein damx | EQ875_01186 | Not Available | Positive | 1321987 - 1322574 | 21165.2 |
| maltose o-acetyltransferase | EQ875_01187 | Not Available | Positive | 1322751 - 1323305 | 20171.2 |
| d-alanine--d-alanine ligase a | EQ875_01188 | Not Available | Positive | 1323509 - 1324501 | 36711.2 |
| hypothetical protein | EQ875_01189 | Not Available | Negative | 1324594 - 1325565 | 37035.4 |
| hypothetical protein | EQ875_01190 | Not Available | Positive | 1325860 - 1326219 | 13831.7 |
| hypothetical protein | EQ875_01191 | Not Available | Negative | 1326274 - 1326780 | 18677.4 |
| hypothetical protein | EQ875_01192 | Not Available | Negative | 1326879 - 1327478 | 22854.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


