Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01143 | Not Available | Negative | 1282556 - 1284202 | 61920.3 |
| adaptive-response sensory-kinase sasa | EQ875_01144 | Not Available | Negative | 1284381 - 1285709 | 49910.9 |
| transcriptional regulatory protein qseb | EQ875_01145 | Not Available | Negative | 1285699 - 1286358 | 24516.6 |
| hypothetical protein | EQ875_01146 | Not Available | Negative | 1286355 - 1286756 | 15228.4 |
| peptidyl-prolyl cis-trans isomerase c | EQ875_01147 | Not Available | Positive | 1286936 - 1287262 | 11907.7 |
| putative n-acetyltransferase yafp | EQ875_01148 | Not Available | Positive | 1287325 - 1287786 | 17600.2 |
| hypothetical protein | EQ875_01149 | Not Available | Negative | 1287859 - 1288032 | 6531.77 |
| hypothetical protein | EQ875_01150 | Not Available | Positive | 1288250 - 1288648 | 15165.3 |
| hypothetical protein | EQ875_01151 | Not Available | Positive | 1288777 - 1289025 | 9560.6 |
| putative malate transporter yfls | EQ875_01152 | Not Available | Positive | 1289245 - 1290666 | 50604.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


