Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01133 | Not Available | Negative | 1266127 - 1267152 | 37629.9 |
| p-hydroxybenzoic acid efflux pump subunit aaea | EQ875_01134 | Not Available | Negative | 1267177 - 1268244 | 39515.0 |
| hth-type transcriptional regulator dmlr | EQ875_01135 | Not Available | Positive | 1268348 - 1269226 | 33034.3 |
| hypothetical protein | EQ875_01136 | Not Available | Negative | 1269282 - 1269554 | 10078.7 |
| hypothetical protein | EQ875_01137 | Not Available | Positive | 1270056 - 1271588 | 55565.1 |
| hypothetical protein | EQ875_01138 | Not Available | Negative | 1271620 - 1272330 | 27286.1 |
| hth-type transcriptional regulator malt | EQ875_01139 | Not Available | Negative | 1272349 - 1275057 | 103736.0 |
| maltodextrin phosphorylase | EQ875_01140 | Not Available | Positive | 1275480 - 1277942 | 92778.5 |
| 4-alpha-glucanotransferase | EQ875_01141 | Not Available | Positive | 1278058 - 1280238 | 81907.1 |
| 1,4-alpha-glucan branching enzyme glgb | EQ875_01142 | Not Available | Positive | 1280254 - 1282440 | 83581.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


