Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01063 | Not Available | Negative | 1195042 - 1195968 | 34385.1 |
| hypothetical protein | EQ875_01064 | Not Available | Negative | 1196436 - 1196642 | 7690.98 |
| hypothetical protein | EQ875_01065 | Not Available | Positive | 1197082 - 1197516 | 16814.9 |
| hypothetical protein | EQ875_01066 | Not Available | Negative | 1197975 - 1200002 | 76299.8 |
| hypothetical protein | EQ875_01067 | Not Available | Negative | 1200807 - 1201934 | 42817.1 |
| hypothetical protein | EQ875_01068 | Not Available | Negative | 1201977 - 1202381 | 15102.9 |
| hypothetical protein | EQ875_01069 | Not Available | Positive | 1202508 - 1203032 | 19738.8 |
| hypothetical protein | EQ875_01070 | Not Available | Negative | 1203022 - 1203282 | 9575.88 |
| inner membrane protein yccf | EQ875_01071 | Not Available | Positive | 1203487 - 1203942 | 16287.1 |
| hypothetical protein | EQ875_01072 | Not Available | Positive | 1204118 - 1204603 | 17120.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


