Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01021 | Not Available | Negative | 1151415 - 1152230 | 29349.9 |
| maltoporin | EQ875_01022 | Not Available | Negative | 1152333 - 1153583 | 45475.6 |
| hypothetical protein | EQ875_01023 | Not Available | Negative | 1154213 - 1154392 | 7198.2 |
| maltose/maltodextrin import atp-binding protein malk | EQ875_01024 | Not Available | Negative | 1154669 - 1155775 | 40890.5 |
| maltose-binding periplasmic protein | EQ875_01025 | Not Available | Positive | 1156204 - 1157385 | 42499.5 |
| maltose transport system permease protein malf | EQ875_01026 | Not Available | Positive | 1157461 - 1159056 | 58603.9 |
| maltose transport system permease protein malg | EQ875_01027 | Not Available | Positive | 1159068 - 1159958 | 32050.1 |
| protein sufa | EQ875_01028 | Not Available | Positive | 1160325 - 1160693 | 13384.9 |
| fes cluster assembly protein sufb | EQ875_01029 | Not Available | Positive | 1160697 - 1162175 | 54693.1 |
| putative atp-dependent transporter sufc | EQ875_01030 | Not Available | Positive | 1162178 - 1162921 | 27545.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


