Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EQ875_01001 | Not Available | Positive | 1126425 - 1127213 | 29335.1 |
| hypothetical protein | EQ875_01002 | Not Available | Positive | 1127210 - 1128574 | 48895.1 |
| hypothetical protein | EQ875_01003 | Not Available | Positive | 1128574 - 1129107 | 20039.8 |
| hypothetical protein | EQ875_01004 | Not Available | Positive | 1129104 - 1129508 | 14759.7 |
| hypothetical protein | EQ875_01005 | Not Available | Positive | 1129540 - 1130181 | 23260.2 |
| hypothetical protein | EQ875_01006 | Not Available | Positive | 1130178 - 1131356 | 44523.0 |
| hypothetical protein | EQ875_01007 | Not Available | Positive | 1131474 - 1131938 | 17511.8 |
| hypothetical protein | EQ875_01008 | Not Available | Negative | 1132030 - 1133031 | 38125.2 |
| pantothenate precursors transporter pans | EQ875_01009 | Not Available | Negative | 1133197 - 1134057 | 30869.8 |
| hypothetical protein | EQ875_01010 | Not Available | Positive | 1134277 - 1134708 | 16411.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


