Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain JM-2017 EQ875_137 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1300119 bp
Thymine Count
1309868 bp
Guanine Count
908294 bp
Cytosine Count
877454 bp
Genome Length
4406237 bp
Protein-coding Genes
3742 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/alanine antiporter | EQ875_00891 | Not Available | Negative | 989246 - 990904 | 58788.2 |
| hypothetical protein | EQ875_00892 | Not Available | Negative | 991369 - 992055 | 25783.8 |
| vitamin b12-dependent ribonucleoside-diphosphate reductase | EQ875_00893 | Not Available | Negative | 992084 - 994234 | 80495.6 |
| porin-like protein l | EQ875_00894 | Not Available | Negative | 994672 - 995682 | 37358.4 |
| outer membrane pore protein e | EQ875_00895 | Not Available | Negative | 995996 - 997021 | 37113.5 |
| thiol:disulfide interchange protein dsbl | EQ875_00896 | Not Available | Negative | 997349 - 997975 | 23379.1 |
| chaperone protein dnak | EQ875_00897 | Not Available | Positive | 998229 - 999581 | 50107.8 |
| hypothetical protein | EQ875_00898 | Not Available | Negative | 999686 - 999994 | 10963.3 |
| hypothetical protein | EQ875_00899 | Not Available | Positive | 1000267 - 1000902 | 24114.8 |
| hypothetical protein | EQ875_00900 | Not Available | Positive | 1001051 - 1001461 | 16296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


