Vagococcus silagei strain 2B-2

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Vagococcus

Description

Vagococcus silagei strain 2B-2 is characterized by the presence of flagella, which likely contributes to its motility. This feature can be significant for its ecological interactions and adaptation within various environments. The strain contains a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SDGV00000000.1, providing a reference for further research and analysis. This accession is crucial for tracing genetic information and comparing traits with other microbial strains. The presence of flagella suggests that Vagococcus silagei strain 2B-2 may exhibit active movement in its environment, possibly aiding in the colonization of substrates or the pursuit of nutrients. This motility can enhance its ecological role, particularly in silage environments where microbial interactions play a critical part in fermentation processes. Overall, the traits of Vagococcus silagei strain 2B-2 highlight its potential adaptability and functionality in specific ecological niches, particularly in relation to its motility and genetic structure. Understanding these characteristics could provide insights into its role in microbial communities and its applications in fermentation technology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusVagococcus
SpeciesVagococcus silagei
Strainstrain 2B-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vagococcus silagei strain 2B-2 contig_51, whole genome shotgun

Gene Summary

Adenine Count

817263 bp

Thymine Count

831330 bp

Guanine Count

417299 bp

Cytosine Count

459736 bp

Genome Length

2529974 bp

Protein-coding Genes

2378 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha-ketoacid dehydrogenase subunit betaESZ54_10335Not AvailablePositive2088942 - 208996436687.2
2-oxo acid dehydrogenase subunit e2ESZ54_10340Not AvailablePositive2089983 - 209118543104.4
dsba family proteinESZ54_10345Not AvailableNegative2091381 - 209188719177.8
atp-dependent clp endopeptidase proteolytic subunit clppESZ54_10350Not AvailableNegative2091914 - 209251021732.1
duf5067 domain-containing proteinESZ54_10355Not AvailableNegative2092672 - 209326221651.6
hypothetical proteinESZ54_10360Not AvailableNegative2093456 - 20936597495.21
Trna-argNot AvailableNot AvailablePositive2093809 - 2093880Not Available
rna polymerase sigma-54 factorESZ54_10370Not AvailablePositive2093949 - 209528351781.8
sorc family transcriptional regulatorESZ54_10375Not AvailablePositive2095462 - 209649938476.8
type i glyceraldehyde-3-phosphate dehydrogenaseESZ54_10380Not AvailablePositive2096544 - 209754835736.6

Displaying genes 2041 – 2050 of 2453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.