Vagococcus silagei strain 2B-2

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Enterococcaceae

Genus

Vagococcus

Description

Vagococcus silagei strain 2B-2 is characterized by the presence of flagella, which likely contributes to its motility. This feature can be significant for its ecological interactions and adaptation within various environments. The strain contains a single replicon, indicating a streamlined genetic organization that may facilitate efficient replication and gene regulation. The strain is cataloged under the accession number SDGV00000000.1, providing a reference for further research and analysis. This accession is crucial for tracing genetic information and comparing traits with other microbial strains. The presence of flagella suggests that Vagococcus silagei strain 2B-2 may exhibit active movement in its environment, possibly aiding in the colonization of substrates or the pursuit of nutrients. This motility can enhance its ecological role, particularly in silage environments where microbial interactions play a critical part in fermentation processes. Overall, the traits of Vagococcus silagei strain 2B-2 highlight its potential adaptability and functionality in specific ecological niches, particularly in relation to its motility and genetic structure. Understanding these characteristics could provide insights into its role in microbial communities and its applications in fermentation technology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyEnterococcaceae
GenusVagococcus
SpeciesVagococcus silagei
Strainstrain 2B-2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vagococcus silagei strain 2B-2 contig_51, whole genome shotgun

Gene Summary

Adenine Count

817263 bp

Thymine Count

831330 bp

Guanine Count

417299 bp

Cytosine Count

459736 bp

Genome Length

2529974 bp

Protein-coding Genes

2378 genes

Non-Coding Genes

75 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dutp diphosphataseESZ54_07980Not AvailableNegative1603956 - 160448319303.9
potassium transporter kupESZ54_07985Not AvailableNegative1604599 - 160664476005.0
glutamate 5-kinaseESZ54_07990Not AvailablePositive1607015 - 160781528785.5
glutamate-5-semialdehyde dehydrogenaseESZ54_07995Not AvailablePositive1607839 - 160908345141.0
copper abc transporter permeaseESZ54_08000Not AvailablePositive1609255 - 1611909101009.0
dna starvation/stationary phase protection proteinESZ54_08005Not AvailableNegative1611977 - 161244117450.8
duf5105 domain-containing proteinESZ54_08010Not AvailableNegative1612510 - 161322927332.7
prepilin peptidaseESZ54_08015Not AvailablePositive1613360 - 161407628223.7
dna-directed rna polymerase subunit beta'ESZ54_08020Not AvailableNegative1614124 - 1617771136447.0
dna-directed rna polymerase subunit betaESZ54_08025Not AvailableNegative1617830 - 1621408133295.0

Displaying genes 1581 – 1590 of 2453 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.