Hydrotalea sp. AMD

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Hydrotalea

Description

Hydrotalea sp. AMD is a microaerophilic bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific environmental niches. The unique oxygen requirement of Hydrotalea sp. AMD suggests that it thrives in low-oxygen environments, which could influence its ecological roles and interactions within microbial communities. The designation of the species is supported by the accession number SCKY00000000.1, which provides a reference for further genomic and functional studies. Microaerophilic bacteria, such as Hydrotalea sp. AMD, are often found in environments like sediments, soils, and other ecosystems where oxygen levels fluctuate, making them vital components in biogeochemical cycles, particularly those involving nitrogen and carbon. The presence of Hydrotalea sp. AMD in such environments may facilitate the breakdown of organic matter and the cycling of nutrients, thereby influencing soil health and ecosystem productivity. Understanding the specific roles and interactions of Hydrotalea sp. AMD within its habitat can provide insights into microbial ecology and the importance of microbial diversity in maintaining ecosystem balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusHydrotalea
SpeciesHydrotalea sp. AMD
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hydrotalea sp. AMD

Gene Summary

Adenine Count

1236513 bp

Thymine Count

1240864 bp

Guanine Count

732955 bp

Cytosine Count

722584 bp

Genome Length

3939521 bp

Protein-coding Genes

3501 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEO766_00045Not AvailableNegative9971 - 1026111613.1
hypothetical proteinEO766_00050Not AvailablePositive10470 - 1079912762.1
oxidoreductaseEO766_00055Not AvailableNegative10839 - 1186437607.1
trna threonylcarbamoyladenosine dehydrataseEO766_00060Not AvailablePositive11893 - 1262426903.2
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive13253 - 13352Not Available
duf1343 domain-containing proteinEO766_00065Not AvailableNegative12621 - 1379343210.9
ykgj family cysteine cluster proteinEO766_00070Not AvailableNegative13812 - 1424016157.5
type iia dna topoisomerase subunit bEO766_00075Not AvailablePositive14571 - 1645471634.5
duf1835 domain-containing proteinEO766_00080Not AvailablePositive16485 - 1731832530.3
dna gyrase/topoisomerase iv subunit aEO766_00085Not AvailablePositive17387 - 1990696147.5

Displaying genes 11 – 20 of 3568 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.