Hydrotalea sp. AMD

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Hydrotalea

Description

Hydrotalea sp. AMD is a microaerophilic bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific environmental niches. The unique oxygen requirement of Hydrotalea sp. AMD suggests that it thrives in low-oxygen environments, which could influence its ecological roles and interactions within microbial communities. The designation of the species is supported by the accession number SCKY00000000.1, which provides a reference for further genomic and functional studies. Microaerophilic bacteria, such as Hydrotalea sp. AMD, are often found in environments like sediments, soils, and other ecosystems where oxygen levels fluctuate, making them vital components in biogeochemical cycles, particularly those involving nitrogen and carbon. The presence of Hydrotalea sp. AMD in such environments may facilitate the breakdown of organic matter and the cycling of nutrients, thereby influencing soil health and ecosystem productivity. Understanding the specific roles and interactions of Hydrotalea sp. AMD within its habitat can provide insights into microbial ecology and the importance of microbial diversity in maintaining ecosystem balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusHydrotalea
SpeciesHydrotalea sp. AMD
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hydrotalea sp. AMD

Gene Summary

Adenine Count

1236513 bp

Thymine Count

1240864 bp

Guanine Count

732955 bp

Cytosine Count

722584 bp

Genome Length

3939521 bp

Protein-coding Genes

3501 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endoribonuclease cas6EO766_00890Not AvailablePositive197740 - 19852829948.4
wyl domain-containing proteinEO766_00895Not AvailablePositive198538 - 19942534668.2
type i-b crispr-associated protein cas8b1/cst1EO766_00900Not AvailablePositive199660 - 20135765992.8
type i-b crispr-associated protein cas7/cst2/devrEO766_00905Not AvailablePositive201380 - 20248041370.2
type i-b crispr-associated protein cas5EO766_00910Not AvailablePositive202480 - 20315425830.2
crispr-associated helicase/endonuclease cas3EO766_00915Not AvailablePositive203179 - 20550389802.1
crispr-associated protein cas4EO766_00920Not AvailablePositive205899 - 20642920562.8
hypothetical proteinEO766_00925Not AvailablePositive207060 - 20756920187.1
type i-b crispr-associated endonuclease cas1EO766_00930Not AvailablePositive207814 - 20881838814.8
crispr-associated endonuclease cas2EO766_00935Not AvailablePositive208860 - 20912310452.1

Displaying genes 181 – 190 of 3568 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.