Hydrotalea sp. AMD

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Hydrotalea

Description

Hydrotalea sp. AMD is a microaerophilic bacterium characterized by its rod-shaped morphology. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in specific environmental niches. The unique oxygen requirement of Hydrotalea sp. AMD suggests that it thrives in low-oxygen environments, which could influence its ecological roles and interactions within microbial communities. The designation of the species is supported by the accession number SCKY00000000.1, which provides a reference for further genomic and functional studies. Microaerophilic bacteria, such as Hydrotalea sp. AMD, are often found in environments like sediments, soils, and other ecosystems where oxygen levels fluctuate, making them vital components in biogeochemical cycles, particularly those involving nitrogen and carbon. The presence of Hydrotalea sp. AMD in such environments may facilitate the breakdown of organic matter and the cycling of nutrients, thereby influencing soil health and ecosystem productivity. Understanding the specific roles and interactions of Hydrotalea sp. AMD within its habitat can provide insights into microbial ecology and the importance of microbial diversity in maintaining ecosystem balance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusHydrotalea
SpeciesHydrotalea sp. AMD
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Hydrotalea sp. AMD

Gene Summary

Adenine Count

1236513 bp

Thymine Count

1240864 bp

Guanine Count

732955 bp

Cytosine Count

722584 bp

Genome Length

3939521 bp

Protein-coding Genes

3501 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s2EO766_07620Not AvailablePositive1662168 - 166304932264.0
elongation factor tsEO766_07625Not AvailablePositive1663246 - 166408829687.6
ump kinaseEO766_07630Not AvailablePositive1664199 - 166491526317.4
tolc family proteinEO766_07635Not AvailablePositive1664978 - 166628848106.8
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeEO766_07640Not AvailablePositive1666322 - 166746443057.9
fatty acid desaturaseEO766_07645Not AvailablePositive1667534 - 166851137875.5
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseEO766_07650Not AvailableNegative1668544 - 166956636708.9
beta-glucosidaseEO766_07655Not AvailableNegative1669755 - 167214286699.9
crp/fnr family transcriptional regulatorEO766_07660Not AvailableNegative1672211 - 167277422176.8
mechanosensitive ion channel family proteinEO766_07665Not AvailableNegative1672859 - 167475471513.5

Displaying genes 1511 – 1520 of 3568 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.