Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoh | EPS91_02035 | Not Available | Positive | 420858 - 421712 | 32498.7 |
| branched-chain amino acid abc transporter substrate-binding protein | EPS91_02040 | Not Available | Positive | 421984 - 423087 | 39064.5 |
| aspartate 1-decarboxylase autocleavage activator panm | EPS91_02045 | Not Available | Negative | 423275 - 423658 | 14560.4 |
| high-affinity branched-chain amino acid abc transporter substrate-binding protein livk | EPS91_02050 | Not Available | Positive | 424082 - 425191 | 39495.0 |
| high-affinity branched-chain amino acid abc transporter permease livh | EPS91_02055 | Not Available | Positive | 425239 - 426165 | 32966.4 |
| high-affinity branched-chain amino acid abc transporter permease livm | EPS91_02060 | Not Available | Positive | 426162 - 427439 | 46306.2 |
| abc transporter atp-binding protein | EPS91_02065 | Not Available | Positive | 427436 - 428203 | 28432.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | EPS91_02070 | Not Available | Positive | 428205 - 428918 | 26297.9 |
| hypothetical protein | EPS91_02075 | Not Available | Positive | 429037 - 429783 | 28728.7 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | EPS91_02080 | Not Available | Positive | 430143 - 431459 | 48468.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





