Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | EPS91_01935 | Not Available | Negative | 402629 - 403030 | 15108.7 |
| nickel import atp-binding protein nike | EPS91_01940 | Not Available | Negative | 403036 - 403842 | 29698.4 |
| nickel import atp-binding protein nikd | EPS91_01945 | Not Available | Negative | 403839 - 404603 | 26814.2 |
| nickel abc transporter permease subunit nikc | EPS91_01950 | Not Available | Negative | 404603 - 405436 | 30363.8 |
| nickel abc transporter permease subunit nikb | EPS91_01955 | Not Available | Negative | 405433 - 406377 | 35237.3 |
| nickel abc transporter, nickel/metallophore periplasmic binding protein | EPS91_01960 | Not Available | Negative | 406377 - 407951 | 58824.3 |
| 4'-phosphopantetheinyl transferase acpt | EPS91_01965 | Not Available | Negative | 408062 - 408649 | 21715.8 |
| ai-2e family transporter | EPS91_01970 | Not Available | Negative | 408704 - 409753 | 38480.8 |
| mfs transporter | EPS91_01975 | Not Available | Positive | 409852 - 411111 | 44132.0 |
| duf1795 domain-containing protein | EPS91_01980 | Not Available | Negative | 411105 - 411662 | 19788.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





