Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EPS91_01885 | Not Available | Positive | 394946 - 396070 | 41066.2 |
| type ii toxin-antitoxin system hica family toxin | EPS91_01890 | Not Available | Positive | 396143 - 396418 | 10171.5 |
| type ii toxin-antitoxin system hicb family antitoxin | EPS91_01895 | Not Available | Positive | 396415 - 396774 | 13403.0 |
| class ii aldolase | EPS91_01900 | Not Available | Negative | 396824 - 397684 | 31387.8 |
| hpr family phosphocarrier protein | EPS91_01905 | Not Available | Negative | 397716 - 397985 | 9779.73 |
| carbohydrate kinase | EPS91_01910 | Not Available | Negative | 397975 - 399483 | 55642.7 |
| pts galactitol transporter subunit iic | EPS91_01915 | Not Available | Negative | 399476 - 400834 | 48739.4 |
| pts sugar transporter subunit iib | EPS91_01920 | Not Available | Negative | 400908 - 401189 | 9823.0 |
| pts sugar transporter subunit iia | EPS91_01925 | Not Available | Negative | 401186 - 401659 | 17520.4 |
| gntr family transcriptional regulator | EPS91_01930 | Not Available | Negative | 401684 - 402430 | 28479.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





