Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_01580 | Not Available | Negative | 329564 - 329746 | 6859.32 |
| prepilin peptidase | EPS91_01585 | Not Available | Positive | 329722 - 330531 | 29440.7 |
| hypothetical protein | EPS91_01590 | Not Available | Positive | 330597 - 331007 | 14640.8 |
| type ii secretion system protein gspc | EPS91_01595 | Not Available | Positive | 331025 - 331984 | 35660.4 |
| type ii secretion system protein gspd | EPS91_01600 | Not Available | Positive | 332014 - 334074 | 74293.3 |
| type ii secretion system protein gspe | EPS91_01605 | Not Available | Positive | 334074 - 335567 | 55183.7 |
| type ii secretion system protein gspf | EPS91_01610 | Not Available | Positive | 335567 - 336790 | 45002.9 |
| type ii secretion system protein gspg | EPS91_01615 | Not Available | Positive | 336807 - 337262 | 16647.8 |
| type ii secretion system protein gsph | EPS91_01620 | Not Available | Positive | 337266 - 337829 | 21113.7 |
| type ii secretion system protein gspi | EPS91_01625 | Not Available | Positive | 337826 - 338197 | 13691.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





