Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-binding alcohol dehydrogenase family protein | EPS91_01330 | Not Available | Negative | 272211 - 273227 | 36779.1 |
| mannitol dehydrogenase family protein | EPS91_01335 | Not Available | Negative | 273224 - 274696 | 54542.9 |
| fadr family transcriptional regulator | EPS91_01340 | Not Available | Negative | 275019 - 275768 | 29239.9 |
| ygiq family radical sam protein | EPS91_01345 | Not Available | Positive | 276020 - 278239 | 83527.5 |
| lipoprotein yqhh | EPS91_01350 | Not Available | Negative | 278281 - 278538 | 9499.55 |
| duf3828 domain-containing protein | EPS91_01355 | Not Available | Negative | 278589 - 279515 | 35033.1 |
| 2,5-didehydrogluconate reductase dkga | EPS91_01360 | Not Available | Negative | 279715 - 280542 | 31111.4 |
| alcohol dehydrogenase | EPS91_01365 | Not Available | Negative | 280647 - 281810 | 42099.4 |
| arac family transcriptional regulator | EPS91_01370 | Not Available | Positive | 281947 - 282903 | 36000.9 |
| deda family protein | EPS91_01375 | Not Available | Negative | 282943 - 283602 | 24135.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





