Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system antitoxin higa | EPS91_00975 | Not Available | Positive | 192723 - 193139 | 14999.3 |
| nadph-dependent 2,4-dienoyl-coa reductase | EPS91_00980 | Not Available | Negative | 193226 - 195244 | 72678.6 |
| alpha-glucosidase | EPS91_00985 | Not Available | Negative | 195415 - 197766 | 88367.7 |
| protein ygjj | EPS91_00990 | Not Available | Negative | 197783 - 198853 | 40145.6 |
| amino acid permease | EPS91_00995 | Not Available | Negative | 198987 - 200420 | 52175.7 |
| beta-galactosidase subunit beta | EPS91_01000 | Not Available | Negative | 200483 - 200932 | 17457.6 |
| beta-galactosidase subunit alpha | EPS91_01005 | Not Available | Negative | 200929 - 204021 | 117868.0 |
| transcriptional regulator ebgr | EPS91_01010 | Not Available | Negative | 204205 - 205188 | 36235.6 |
| pp_00197 | EPS91_01015 | Not Available | Positive | 205407 - 205739 | Not Available |
| putrescine aminotransferase | EPS91_01020 | Not Available | Negative | 205781 - 207271 | 53837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





