Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EPS91_00920 | Not Available | Negative | 180744 - 182042 | 46909.0 |
| glucuronate isomerase | EPS91_00925 | Not Available | Positive | 182525 - 183937 | 53990.1 |
| altronate dehydratase | EPS91_00930 | Not Available | Positive | 183952 - 185439 | 54068.2 |
| ygjv family protein | EPS91_00935 | Not Available | Positive | 185522 - 186073 | 20594.8 |
| serine/threonine transporter sstt | EPS91_00940 | Not Available | Negative | 186077 - 187321 | 43494.4 |
| terc family membrane protein alx | EPS91_00945 | Not Available | Negative | 187645 - 188610 | 35983.2 |
| gfo/idh/moca family oxidoreductase | EPS91_00950 | Not Available | Negative | 188894 - 189880 | 36232.3 |
| vancomycin high temperature exclusion protein | EPS91_00955 | Not Available | Negative | 189959 - 190651 | 25538.4 |
| m48 family peptidase | EPS91_00960 | Not Available | Negative | 190728 - 191231 | 19456.6 |
| 23s rrna (guanine(1835)-n(2))-methyltransferase rlmg | EPS91_00965 | Not Available | Positive | 191316 - 192452 | 42312.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





