Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EPS91_00870 | Not Available | Negative | 171818 - 172222 | 15148.0 |
| duf883 domain-containing protein | EPS91_00875 | Not Available | Negative | 172225 - 172530 | 11052.1 |
| duf1090 domain-containing protein | EPS91_00880 | Not Available | Negative | 172568 - 172936 | 13906.4 |
| envz/ompr regulon moderator mzra | EPS91_00885 | Not Available | Negative | 173083 - 173466 | 14173.0 |
| deda family protein | EPS91_00890 | Not Available | Negative | 173470 - 174132 | 24587.0 |
| transcriptional regulator exur | EPS91_00895 | Not Available | Negative | 174477 - 175253 | 29837.3 |
| fimbrial protein | EPS91_00900 | Not Available | Positive | 175639 - 176262 | 23049.6 |
| fimbrial protein | EPS91_00905 | Not Available | Positive | 176292 - 176792 | 17668.5 |
| fimbrial protein | EPS91_00910 | Not Available | Positive | 176883 - 179567 | 98550.9 |
| pilus assembly protein cbld | EPS91_00915 | Not Available | Positive | 179564 - 180646 | 40217.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





