Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 151828 - 152204 | Not Available |
| yhac family protein | EPS91_00770 | Not Available | Negative | 152312 - 153499 | 45211.4 |
| dna-binding transcriptional activator tdcr | EPS91_00780 | Not Available | Negative | 154315 - 154659 | 13598.4 |
| transcriptional regulator tdca | EPS91_00785 | Not Available | Positive | 154848 - 155786 | 34524.9 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | EPS91_00790 | Not Available | Positive | 155885 - 156874 | 35234.5 |
| threonine/serine transporter tdcc | EPS91_00795 | Not Available | Positive | 156896 - 158227 | 48895.8 |
| propionate kinase | EPS91_00800 | Not Available | Positive | 158253 - 159461 | 43398.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | EPS91_00805 | Not Available | Positive | 159495 - 161789 | 85940.4 |
| enamine/imine deaminase | EPS91_00810 | Not Available | Positive | 161803 - 162192 | 14008.0 |
| l-serine ammonia-lyase | EPS91_00815 | Not Available | Positive | 162264 - 163628 | 48476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





