Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication protein | EPS91_26535 | Not Available | Positive | 5233322 - 5234230 | 34391.1 |
| hypothetical protein | EPS91_26540 | Not Available | Negative | 5234423 - 5234821 | 15592.0 |
| mobilization protein | EPS91_26545 | Not Available | Positive | 5234998 - 5235318 | 12567.5 |
| dna-packaging protein | EPS91_26550 | Not Available | Positive | 5235435 - 5235551 | 4212.84 |
| duf4222 domain-containing protein | EPS91_26555 | Not Available | Negative | 5235689 - 5235871 | 6823.18 |
| anta/antb antirepressor family protein | EPS91_26560 | Not Available | Negative | 5235864 - 5236697 | 31019.1 |
| hypothetical protein | EPS91_26565 | Not Available | Negative | 5236710 - 5237141 | 16367.6 |
| alpa family phage regulatory protein | EPS91_26570 | Not Available | Negative | 5237141 - 5237359 | 8046.8 |
| hypothetical protein | EPS91_26575 | Not Available | Negative | 5237830 - 5238480 | 24305.3 |
| is3 family transposase | EPS91_26585 | Not Available | Positive | 5239379 - 5239705 | 12809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





