Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | EPS91_26420 | Not Available | Negative | 5218391 - 5218677 | 10448.2 |
| Trna-thr | Not Available | Not Available | Positive | 5218792 - 5218867 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5218874 - 5218948 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 5219065 - 5219149 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 5219158 - 5219233 | Not Available |
| type i pantothenate kinase | EPS91_26445 | Not Available | Positive | 5219595 - 5220545 | 36361.8 |
| bifunctional biotin--[acetyl-coa-carboxylase] synthetase/biotin operon repressor | EPS91_26450 | Not Available | Negative | 5220575 - 5221540 | 35326.1 |
| udp-n-acetylmuramate dehydrogenase | EPS91_26455 | Not Available | Negative | 5221537 - 5222565 | 37858.1 |
| is1 family transposase | EPS91_26460 | Not Available | Positive | 5222767 - 5222920 | 6096.44 |
| biofilm development ymgb/arir family protein | EPS91_26475 | Not Available | Positive | 5223682 - 5223939 | 9894.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





