Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase hpii | EPS91_25380 | Not Available | Negative | 5072562 - 5074823 | 84244.2 |
| cell division activator ceda | EPS91_25385 | Not Available | Positive | 5075006 - 5075269 | 10219.5 |
| hypothetical protein | EPS91_25395 | Not Available | Positive | 5075945 - 5076142 | 7436.73 |
| tail fiber domain-containing protein | EPS91_25400 | Not Available | Positive | 5076152 - 5077192 | 38038.4 |
| hypothetical protein | EPS91_25405 | Not Available | Positive | 5077235 - 5077528 | 10949.4 |
| hypothetical protein | EPS91_25415 | Not Available | Negative | 5078076 - 5078870 | 29888.5 |
| iron/manganese abc transporter permease subunit sitd | EPS91_25420 | Not Available | Negative | 5079343 - 5080200 | 30748.0 |
| iron/manganese abc transporter permease subunit sitc | EPS91_25425 | Not Available | Negative | 5080197 - 5081054 | 30815.6 |
| iron/manganese abc transporter atp-binding protein sitb | EPS91_25430 | Not Available | Negative | 5081051 - 5081878 | 30071.4 |
| iron/manganese abc transporter substrate-binding protein sita | EPS91_25435 | Not Available | Negative | 5081878 - 5082792 | 33560.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





