Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | EPS91_25205 | Not Available | Negative | 5048588 - 5049328 | 28163.5 |
| 3'-5' exoribonuclease | EPS91_25210 | Not Available | Positive | 5049442 - 5049509 | 2541.06 |
| excisionase | EPS91_25215 | Not Available | Positive | 5049574 - 5049822 | 9211.41 |
| integrase | EPS91_25220 | Not Available | Positive | 5049800 - 5050930 | 43170.1 |
| outer membrane protein ompw | EPS91_25225 | Not Available | Negative | 5050976 - 5051614 | 22940.2 |
| upf0259 family protein | EPS91_25235 | Not Available | Positive | 5051969 - 5052712 | 26420.6 |
| septation protein a | EPS91_25240 | Not Available | Positive | 5052742 - 5053281 | 20781.3 |
| acyl-coa thioester hydrolase ycia | EPS91_25245 | Not Available | Positive | 5053386 - 5053784 | 14231.4 |
| tonb system transport protein tonb | EPS91_25250 | Not Available | Negative | 5053824 - 5054540 | 25911.4 |
| ycii family protein | EPS91_25255 | Not Available | Positive | 5054764 - 5055060 | 10602.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





