Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyribonucleotide nucleotidyltransferase | EPS91_00565 | Not Available | Positive | 114301 - 116436 | 77106.6 |
| lipoprotein nlpi | EPS91_00570 | Not Available | Positive | 116545 - 117429 | 33622.5 |
| protein yrbn | EPS91_00575 | Not Available | Positive | 117536 - 117616 | 2979.59 |
| dead/deah family atp-dependent rna helicase | EPS91_00580 | Not Available | Positive | 117609 - 119498 | 70580.6 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 118039 - 118146 | Not Available |
| tryptophan permease | EPS91_00585 | Not Available | Positive | 119652 - 120896 | 44367.2 |
| llm class flavin-dependent oxidoreductase | EPS91_00590 | Not Available | Negative | 121015 - 122022 | 37140.5 |
| u32 family peptidase | EPS91_00595 | Not Available | Negative | 122103 - 122981 | 32520.1 |
| u32 family peptidase | EPS91_00600 | Not Available | Negative | 122990 - 123985 | 37049.2 |
| scp2 domain-containing protein | EPS91_00605 | Not Available | Positive | 124194 - 124718 | 19658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





