Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 42_rectal |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1325138 bp
Thymine Count
1326980 bp
Guanine Count
1359154 bp
Cytosine Count
1352967 bp
Genome Length
5374076 bp
Protein-coding Genes
4877 genes
Non-Coding Genes
364 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf440 family protein | EPS91_24595 | Not Available | Positive | 4950846 - 4951175 | 12687.7 |
| abc transporter atp-binding protein | EPS91_24600 | Not Available | Negative | 4951228 - 4952232 | 37183.8 |
| abc transporter atp-binding protein | EPS91_24605 | Not Available | Negative | 4952229 - 4953242 | 37194.8 |
| oligopeptide abc transporter permease oppc | EPS91_24610 | Not Available | Negative | 4953254 - 4954162 | 33034.0 |
| oligopeptide abc transporter permease oppb | EPS91_24615 | Not Available | Negative | 4954177 - 4955097 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | EPS91_24620 | Not Available | Negative | 4955183 - 4956814 | 60951.1 |
| naat family transporter yche | EPS91_24625 | Not Available | Negative | 4957552 - 4958199 | 23488.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | EPS91_24630 | Not Available | Positive | 4958676 - 4961351 | 96162.5 |
| tetr/acrr family transcriptional regulator | EPS91_24635 | Not Available | Positive | 4961729 - 4962307 | 21412.0 |
| winged helix family transcriptional regulator | EPS91_24640 | Not Available | Positive | 4962330 - 4963148 | 30921.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





